For the in dash 3.5's I have had good luck with these:
They are built for aftermarket head unit type of power, running an amp I would upgrade. (crutchfield is overpriced)
In the doors you will get a million different opinions. I like Infinity kappa series they have great high range. I have used Polk's DB series as well, they have a more balanced mid range sound and are cheaper. Some people swear by the Alpine's, I have never used them but I'm sure you won't be disappointed.
Also be advised many 6x9's will not fit in the front doors without modification. Be prepared to use a spacer. I have 6.5's with a 6x9 to 6.5 adapter plate in front.
Receiver- If you are buying a nav bezel, might as well consider an indash nav receiver. Again you will get a million brand reco's but I have always enjoyed Kenwood excelon line.
Finally, with everything taken apart, add some sound deadening to your doors at the very least. good luck